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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Allen Santos | 17th | Randy Cavazos | 5th | 15th |
| First Basemen | Osmel Rivera | 13th | Martin Miles | 29th | 22nd |
| Second Basemen | Minoru Kume | 17th | Walter Vaive | 7th | Tied for 17th |
| Third Basemen | Tied for 28th | Trevor McBeal | 24th | 29th | |
| Shortstops | Chaim Dijkstra | 7th | Zane Chwalek | 17th | 7th |
| Left Fielders | Paul Rees | 19th | Jose Ronda | 13th | 17th |
| Center Fielders | T.J. Gourley | 21st | Adam Sproul | Tied for 19th | 18th |
| Right Fielders | Tied for 25th | Jon Velez | 12th | 26th | |
| Starting Pitchers | Jose Madrid | 18th | Marcos Herrera | 19th | 18th |
| Relievers | Manny Arango | 12th | Zach Tomory | 6th | 10th |
| Closers | Manny Arango | 17th | Zach Tomory | 12th | 17th |
